Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817897.1_cds_XP_016499368.1_13299
CDS Infomation

[gene=LOC107817982] [db_xref=GeneID:107817982] [protein=3-ketoacyl-CoA synthase 1] [protein_id=XP_016499368.1] [location=join(39155..40329,40975..41398)] [gbkey=CDS]
Sequence

ATGGCGAATGAAAGTATAGAAATGGAAAAAGAGAGGCTAACAGCAGAGATGGATTTCAAA
GATTCATCCTCAGTTGTTATCAAAATTCGGCGAAAATTGCCTGATTTTTTACAATCTGTA
AAGCTTAAATATGTTAAGCTAGGGTATGGTTATTCATGCAACCCTGCTTCTCTTCTTCTC
CTCGTTACCGTTTTGCCTATGGTTACCCTCACTCTTATTCAGCTCACCGGTCTAAAATTA
GACCGGTTTTCTGATATATGGACAAGTCCAACTTTACTTGTTGACACTTCAACCGGTCTT
GCCGGTTTAATAGTGCTCTTTTTCTTTTTAGGTATTTACTATGTCAAGAAACCTAGACCG
GTTTATTTGGTTGATTTTGCTTGTTACAAACCTGAAGATGAGCGAAAAATGTCCGTGGAT
TCGTTCTTGAAGATGACAGAAGAGAACGGCGCATTTACTGACGAGACTATAGTCTTTCAA
AAAAGAATATCTGAACGTTCTGGTTTAGGTGACGAAACCTATTTTCCTAGAGGGATCACA
TCCAACCCACCAAACCTATGCATGAAAGAGGCACGAGCGGAGGCCGAGGCAGTCATGTTC
GGTGCATTGGACCAACTTTTTGCCAAAACCAAAGTCAAGCCCGAGGAAATTGGAATTCTT
ATAGTGAATTGTAGCTTGTTTAATCCAACACCATCTCTCTCCTCAATGATTGTCAACCAT
TACAAGCTCAAAACTGATATCAAGAGTTACAACTTAGGTGGCATGGGCTGTAGTGCTGGT
CTCATTTCAATTGACTTAGCCAAACATCTATTAAAAGCAAATCCAAACACATATGCAGTT
GTTGTTAGCATGGAGAACATTACATTAAATTGGTATTTTGGAAATGATAGGTCAATGTTG
CTATGCAATTGTATATTTCGTATGGGAGGTGCAGCTATGCTTTTGTCTAACAAGTCAAGA
GATCGAACCCGGTCTAAGTACGAGCTGGTCCACACGGTTCGAACCCATAAAGGAGCTGAT
GACAATAGCTACAATTGTGTGTACCAAAGAGAAGATGACAAGGGAGTGATAGGTGTGTCA
TTGGCTCGTGAACTTATGGCAGTAGCTGGGGATGCTCTAAAAACAAACATCACCACGTTA
GGCCCATTGGTGTTACCGCTTTCGGAGCAATTCAGGTTCTTCGTAACGTTGGTCAAGAGG
AAGATGCTAAAAGCAAAAGTGAAGCCCTACATACCAGATTTCAAGCTAGCATTTGAGCAT
TTCTGCATACATGCAGGAGGGAGAGCAGTTTTAGATGAAATACAAAACAACCTAAACCTA
AGTGATTGGCACATGGAACCATCAAGAATGACACTACACAGGTTTGGGAACACTTCAAGC
AGCTCTTTATGGTATGAGTTAGCCTATTCAGAAGCAAAAGGAAGAGTGAGCAAAGGGGAT
AGAATTTGGCAAATAGCATTTGGTTCTGGTTTCAAATGTAACAGTGCTGTGTGGAAATCA
CTTAGAGAAATTGATTGTAATGAAGTCAATAGAAATGGTAACCCTTGGGCTGACTGCATT
CAACGTTACCCTGTGAAAGTTGCCCTTGCCAAGACATAG

Peptide Sequence

PEP ID

XP_016499368.1
PEP Infomation

PREDICTED: 3-ketoacyl-CoA synthase 1 [Nicotiana tabacum]
Sequence

MANESIEMEKERLTAEMDFKDSSSVVIKIRRKLPDFLQSVKLKYVKLGYGYSCNPASLLL
LVTVLPMVTLTLIQLTGLKLDRFSDIWTSPTLLVDTSTGLAGLIVLFFFLGIYYVKKPRP
VYLVDFACYKPEDERKMSVDSFLKMTEENGAFTDETIVFQKRISERSGLGDETYFPRGIT
SNPPNLCMKEARAEAEAVMFGALDQLFAKTKVKPEEIGILIVNCSLFNPTPSLSSMIVNH
YKLKTDIKSYNLGGMGCSAGLISIDLAKHLLKANPNTYAVVVSMENITLNWYFGNDRSML
LCNCIFRMGGAAMLLSNKSRDRTRSKYELVHTVRTHKGADDNSYNCVYQREDDKGVIGVS
LARELMAVAGDALKTNITTLGPLVLPLSEQFRFFVTLVKRKMLKAKVKPYIPDFKLAFEH
FCIHAGGRAVLDEIQNNLNLSDWHMEPSRMTLHRFGNTSSSSLWYELAYSEAKGRVSKGD
RIWQIAFGSGFKCNSAVWKSLREIDCNEVNRNGNPWADCIQRYPVKVALAKT

Transcript Sequence

Gene sequence data has not been registered.